ProNova VINN Excellence Centre for Protein Technology

2011:

• Gantelius, J., Bass, T., Sjöberg, R., Nilsson, P., Andersson Svahn, H. (2011) "A lateral flow protein microarray for rapid and sensitive antibody assays" Int. J. Mol. Sci., 12, 7748-59.

• Häggmark, A., Neiman, M., Drobin, K., Zwahlen, M., Uhlen, M., Nilsson, P. Schwenk, J. M. (2011)  "Classification of protein profiles from antibody microarrays using heat and detergent treatment" N Biotechnol Oct 14. 

• Löfblom, J., Frejd, F.Y. and Ståhl, S. (2011) "Non-immunoglobulin based protein scaffolds" Curr. Opin. Biotechnol. 22: 843-848 .

• Sjöberg R, Sundberg M, Gundberg A, Sivertsson Å, Schwenk JM, Uhlén M, Nilsson P(2011) "Validation of affinity reagents using antigen microarrays" N Biotechnol. Nov 23.

• Konrad A, Eriksson Karlström A and Hober S (2011) "Covalent immunoglobulin labeling through a photoactivable synthetic Z domain", Bioconjug. Chem., 22, 2395-2403.

• Joensson HN and Andersson-Svahn H (2011) “Droplet microfluidics as a tool for protein engineering”, Lab Chip, 11, 4144-7.

• Hjelm, B., Forsström, B., Igel, U., Johannesson, H., Stadler, C., Lundberg, E., Ponten, F., Sjöberg A., Rockberg J., Schwenk J. M., Nilsson, P., Johansson, C., & Uhlén, M. (2011) “Generation of monospecific antibodies based on affinity capture of polyclonal antibodies” Protein Sci., 20, 1824-1835.

• Neiman M, Hedberg JJ, Dönnes PR, Schuppe-Koistinen I, Hanschke SW, Schindler R, Uhlén M, Schwenk JM, Nilsson P (2011)  “Plasma profiling reveals human fibulin-1 as candidate marker for renal impairment”, J Proteome Res, 10: 11. 4925-4934.  .

• Joensson HN, Zhang C, Uhlén M, and Andersson-Svahn H (2011) “A Homogeneous Assay for Protein Analysis in Droplets by Fluorescence Polarization”, Lab Chip, in press.

• Schwenk JM. (2011) “Next-generation plasma profiling: affinity array potential” Bioanalysis, 3, 1543-6.

• Uhlén M, Andersson Svahn H (2011) “Affinity reagents for lab on chips”, Lab Chip, 11, 1417 – 1419.

• Joensson HN, Uhlén M, Andersson Svahn H (2011) “Droplet size based separation by deterministic lateral displacement-separating droplets by cell-induced shrinking”, Lab Chip, 11, 1305-10.

• Ayoglu, B., Häggmark, A., Neiman, M., Igel, U., Uhlén, M., Schwenk, J. & Nilsson, P. (2011)  “Systematic antibody and antigen-based proteomic profiling with microarrays”, Expert Rev Mol Diagn 11: 2. 219-234. 

• Schwenk JM & Nilsson P (2011) “Assessment of antibody specificity using suspension bead arrays”   Methods Mol Biol, 785: 183-189.

• Schwenk, J. M. & Nilsson, P. (2011) “Antibody suspension bead arrays”, Methods Mol Biol, 723: 29-36 

• Kronqvist N, Malm M, Göstring L, Gunneriusson E, Nilsson M, Höidén Guthenberg I, Gedda L, Frejd FY, Ståhl S, Löfblom J. (2011) “Combining phage and staphylococcal surface display for generation of ErbB3-specific Affibody molecules”, Protein Eng Des Sel. 24(4):385-96.

• Löfblom J (2011) “Bacterial display in combinatorial protein engineering” Biotechnol J, 6, 1115-29

2010:

• Eriksson C, Schwenk JM, Sjöberg A, Hober S (2010) “Affibody molecule mediated depletion of HSA and IgG using different buffer compositions – a 15 minute protocol for parallel processing of 1 - 48 samples” Biotechn Appl Biochem, 56, 49-57

• Schwenk, J. M., Igel, U., Neiman, M., Langen, H., Becker, C., Bjartell, A., Ponten, F., Wiklund, F., Grönberg, H., Nilsson, P. & Uhlen, M. (2010)  ”Towards next generation plasma profiling via heat-induced epitope retrieval and array-based assays”, Mol Cell Proteomics, 9: 11. 2497–2507.

• Rockberg J, Löfblom J, Hjelm B, Ståhl S, Uhlén M. (2010) "Epitope mapping using gram-positive surface display", Curr. Protoc. Immunol., Chapter 9:Unit9.9.

• Kronqvist, N., Malm, M., Rockberg, J., Hjelm, B., Uhlen, M., Ståhl, S., & Löfblom, J. (2010) ”Staphylococcal surface display in combinatorial protein engineering and epitope mapping of antibodies”, Recent Pat Biotechnol, 4(3), 171-182.

• Gantelius J, Hamsten C, Neiman M, Schwenk JM, Persson A, Andersson-Svahn H. (2010)  "A lateral flow protein microarray for rapid determination of contagious bovine pleuropneumonia status in bovine serum", J. Microbiol. Methods, 82, 11-18

• Llobera A, Demming S, Joensson HN, Vila-Planas J, Andersson-Svahn H, Buttgenbach S (2010) "Monolithic PDMS passband filters for fluorescence detection" Lab Chip, 10, 1987.

• Fagerberg L, Jonasson K, von Heijne G, Uhlén M, Berglund L (2010) "Prediction of the human membrane proteome" Proteomics, 10, 1141-9.

• Schwenk J, Igel U, Kato B, Nicholson G, Karpe F, Uhlén M, Nilsson P (2010) “Comparative protein profiling of serum and plasma using an antibody suspension bead array approach”, Proteomics, 10, 532-540.

• Hjelm B, Fernández CD, Löfblom J, Ståhl S, Johannesson H, Rockberg J, Uhlén M (2010) "Exploring epitiopes of antibodies towards the human tryptophanyl-tRNA synthetase" N Biotechnol, 27, 129-137.

• Stadler C, Skogs M, Brismar H, Uhlén M, Lundberg E (2010) "A single fixation protocol for proteome-wide immunofluorescence localization studies" J Proteomics, 73, 1067-78.

2009:

• Gantelius J, Hartmann M, Schwenk JM, Roeraade J, Andersson-Svahn H, Joos TO (2009) "Magnetic bead-based detection of autoimmune responses using protein microarrays" N Biotechnology, 26,269-76.

• Rimini R, Schwenk JM, Sundberg M, Sjöberg R, Klevebring D, Gry M, Uhlén M, Nilsson P. (2009) "Validation of serum protein profiles by a dual antibody array approach" J Proteome Res, 73, 252-266.

• Janzi M, Sjöberg R, Wan J, Fischler B, Döbeln Uv, Isaac L, Nilsson P, Hammarström L (2009) "Screening for C3 deficiency in newborns using microarrays" PLos One, 4(4):e5321.

• N. LeBlanc, J. Gantelius, J. Schwenk, K. Ståhl, J. Blomberg, Helene Andersson Svahn and S. Belák (2009) "Development of a magnetic bead microarray for simultaneous and simple detection of four pestiviruses" J Virol Methods, 155, 1-9.

2008:

• Rockberg J, Löfblom J, Hjelm B, Uhlén M & Ståhl S. (2008) "Epitope mapping of antibodies using bacterial surface display" Nat Methods, 5, 1039-1045.

• Schwenk JM, Gry M, Rimini R, Uhlén M, Nilsson P (2008) "Antibody suspension bead arrays within serum proteomics" J Proteome Res, 7, 3168-3179.

2007:

• P. Ståhl, J. Gantelius, C. Natanaelsson, A. Ahmadian, H. Andersson-Svahn and J. Lundeberg (2007) Visual DNA – identification of DNA sequence variations by bead trapping. Genomics, 90, 741-5.