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This pioneering work on a non-immunoglobulin based framework
for affinity protein development was first described in 1995.
The new molecules were called affibodies and were based on
combinatorial protein engineering of the small and robust
a-helical structure of the domains of protein A. Affibody
binding proteins have since then found broad use as selective
binding reagents in biotechnology applications incl. for example
separomics, diagnostics, viral retargeting and in vivo
imaging (see refs below). Structures of affibody-target co-complexes
have been solved by both x-ray crystallography and NMR. In
parallel to the use of phage display technology, new selection
systems for affibody libraries have also been developed both
based on Gram positive bacteria, FACS-sorting of micro beads
and protein fragment complementation assays (PCA).
| Key (own)
publications: |
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Nygren, P.-Å. (2008) "Alternative
binding proteins: Affibody binding proteins developed from
a small three-helix bundle scaffold" FEBS Journal 275,
2668-2676. |
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Hoyer W, Grönwall C, Jonsson
A, Ståhl S, Härd T. "Stabilization of a
beta-hairpin in monomeric Alzheimer's amyloid-beta peptide
inhibits amyloid formation" Proc Natl Acad Sci U S
A. 2008 Apr 1;105(13):5099-104. |
• |
Renberg, B., Nordin, J. Merca, A., Uhlén,
M., Feldwisch, J., Nygren, P.-Å. and Eriksson Karlström,
A. (2007) "Affibody molecules in protein capture microarrays.
evaluation of multidomain ligands and different detection
formats" J. Proteome Res. 6, 171-179. |
• |
Nilsson FY, Tolmachev V. "Affibody molecules:
new protein domains for molecular imaging and targeted tumor
therapy" Curr Opin Drug Discov Devel. 2007 Mar;10(2):167-75.
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Tolmachev V, Orlova A, Nilsson FY, Feldwisch
J, Wennborg A, Abrahmsén L. "Affibody molecules:
potential for in vivo imaging of molecular targets
for cancer therapy" Expert Opin Biol Ther. 2007 Apr;7(4):555-68.
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Renberg, B., Nygren, P.-Å., Eklund,
M. and Eriksson Karlström, A. (2004) "Fluorescence
resonance energy transfer-based detection of analytes using
anti-idiotypic affinity protein pairs" Anal. Biochem.
334, 72-80. |
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Engfeldt, T., Renberg B., Brumer, H., Nygren,
P.-Å. and Eriksson Karlström, A. "Chemical
synthesis of fluorescent-labeled affinity proteins for specific
binding and detection of unlabeled protein" Chem. BioChem.
6, 1043-1050. |
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Renberg, B., Shiroyama, I., Engfeldt, T.,
Nygren, P.-Å. and Eriksson Karlström, A. (2005)
"Affibody protein capture microarrays: synthesis and
evaluation of random and directed immobilization of affibody
molecules" Anal. Biochem. 334, 72-80. |
• |
Nygren, P.-Å and Skerra A. (2004) "Binding
proteins from alternative scaffolds" J. Immunol. Meth.
290, 3-28. |
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Wahlberg, E., Lendel, C., Helgstrand, M.,
Allard, P., Dincbas-Renqvist, V., Hedqvist, A., Berglund,
H., Nygren, P.-Å. and Härd, T. (2003) "An
affibody in complex with a target protein: structure and
coupled folding" Proc. Natl. Acad. Sci. U.S.A. 100,
3185-3190. |
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Högbom, M., Eklund, M., Nygren, P.-Å.
and Nordlund P. (2003) "Crystal structure of an in
vitro evolved affibody-protein complex" Proc.
Natl. Acad. Sci. U.S.A. 100, 3191-3196. |
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Rönnmark, J, Kampf, C., Asplund, A.,
Höidén-Guthenberg, Wester, K., I-M, Pontén,
F., Uhlén, M. and Nygren, P.-Å. (2003)"Affibody-β-galactosidase
immunoconjugates produced as soluble fusion proteins in
the E. coli cytosol". J. Immunol. Meth. 281,
149-160. |
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Rönnmark, J., Hansson, M., Nguyen, T.,
Uhlén, M., Robert, A., Ståhl, S. and Nygren,
P.-Å. (2002) "Construction and characterization
of affibody-Fc chimeras produced in Escherichia coli"
J. Immunol. Meth. 261, 199-211. |
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Karlström, A. and Nygren, P.-Å.
[2001] "Dual labeling of a binding protein allows for
specific fluorescence detection of native protein"
J. Anal. Biochem. 295, 22-30. |
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Nord, K., Gunneriusson, E., Uhlén,
M. and Nygren, P.-Å. (2000) "Ligands selected
from combinatorial libraries of protein a for use in affinity
capture of apolipoprotein A-1 and Taq DNA polymerase"
J. Biotechnol. 80, 45-54. |
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Eklund, Axelsson, Uhlen & Nygren Anti-idiotypic
protein domains selected from protein A-based affibody libraries.
Proteins 48, 454-462 (2002). |
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Nord et al. Recombinant human factor VIII-specific
affinity ligands selected from phage-displayed combinatorial
libraries of protein A. Eur J Biochem 268, 4269-4277 (2001). |
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Gunneriusson, Nord, Uhlen & Nygren Affinity
maturation of a Taq DNA polymerase specific affibody
by helix shuffling. Protein Eng 12, 873-878 (1999). |
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Nygren & Uhlen Scaffolds for engineering
novel binding sites in proteins. Curr Opin Struct Biol 7,
463-469 (1997). |
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Nord et al. Binding proteins selected from
combinatorial libraries of an alpha-helical bacterial receptor
domain. Nature Biotechnol 15, 772-777 (1997). |
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Nord, Nilsson, Nilsson, Uhlen & Nygren
A combinatorial library of an alpha-helical bacterial receptor
domain. Protein Eng 8, 601-608 (1995). |
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